|
TnpDUmer
|
AY123253: 0..0
|
transposon mer region related to that in pDU1358
|
|
aacA4-crA
|
AJ971343: 397..1035
|
has a T to A mutation at nt 283 and a G to T mutation at nt 514 giving the aac(6')-Ib-cr cassette that confers low-level resistance to fluoroquinolones
|
|
aacA4-crC
|
AY259086: 1623..2261
|
has a T to C mutation at nt 283 and a G to T mutation at nt 514 giving the aac(6')-Ib-cr cassette that confers low-level resistance to fluoroquinolones
|
|
qnrA1
|
AY070235: 303..959
|
|
|
qnrA2
|
AY675584: 1..657
|
|
|
qnrA3
|
DQ058661: 1..657
|
|
|
qnrA4
|
DQ058662 : 1..657
|
qnrA3-like; found in Shewanella algae only as of Jan 2018
|
|
qnrA5
|
DQ058663 : 1..657
|
qnrA3-like; found in Shewanella algae only as of Jan 2018
|
|
qnrA6
|
DQ151889 : 1..657
|
qnrA3-like
|
|
qnrA7
|
GQ463707 : 1..657
|
qnrA3-like; found in Shewanella algae only as of Jan 2018
|
|
qnrA8
|
KY554783: 1..657
|
qnrA3-like; found in Shewanella algae only as of Jan 2018
|
|
qnrB1
|
DQ351241: 37..681
|
|
|
qnrB2
|
DQ351242: 1..645
|
qnrB1 group
|
|
qnrB3
|
DQ303920: 37..681
|
qnrB1 group
|
|
qnrB4
|
DQ303921: 3..648
|
|
|
qnrB5
|
DQ303919 : 37..681
|
|
|
qnrB6
|
EF520349: 37..681
|
qnrB1 group
|
|
qnrB7
|
EU043311: 1..645
|
qnrB1 group
|
|
qnrB8
|
EU043312: 1..645
|
only found in Citrobacter freundii as of March 2017
|
|
qnrB9
|
EF526508: 1..645
|
qnrB1 group
|
|
qnrB10
|
DQ631414 : 37..681
|
qnrB5 group
|
|
qnrB11
|
EF653270: 3..648
|
|
|
qnrB12
|
AM774474: 2435..3079
|
qnrB11 group; only found in Citrobacter as of March 2017
|
|
qnrB13
|
EU273755: 37..681
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB14
|
EU273757: 37..681
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB15
|
EU302865: 37..681
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB16
|
EU136183: 37..681
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB17
|
AM919398 : 37..681
|
qnrB1 group; only found in Citrobacter as of April 2017
|
|
qnrB18
|
AM919399: 37..681
|
qnrB1 group; only found in Citrobacter as of April 2017
|
|
qnrB19
|
EU432277 : 37..681
|
qnrB5 group
|
|
qnrB20
|
AB379831: 37..681
|
qnrB1 group
|
|
qnrB21
|
FJ611948: 1..645
|
qnrB8 group
|
|
qnrB22
|
FJ981621: 4..648
|
qnrB4 group; only found in Citrobacter werkmanii as of July 2017, but located on a plasmid
|
|
qnrB23
|
FJ981622: 37..681
|
qnrB1 group; only found in Citrobacter freundii as of April 2017, but located on a plasmid
|
|
qnrB24
|
HM192542 : 37..645
|
qnrB1 group; only found in Citrobacter as of April 2017
|
|
qnrB25
|
HQ172108 : 1..645
|
qnrB8 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB26
|
HQ386846: 37..681
|
qnrB1 group
|
|
qnrB27
|
HM439641 : 1..645
|
only found in Citrobacter braakii as of March 2017
|
|
qnrB28
|
HM439643 : 1..645
|
qnrB27 group; only found in Citrobacter as of March 2017
|
|
qnrB29
|
HM439649: 37..681
|
qnrB1 group; only found in Citrobacter freudii as of April 2017
|
|
qnrB30
|
HM439650: 37..681
|
qnrB1 group; only found in Citrobacter as of April 2017
|
|
qnrB31
|
HQ418999: 37..681
|
|
|
qnrB32
|
EF526508: 37..682
|
qnrB1 group; only foudn in Citrobacter freundii as of April 2017
|
|
qnrB33
|
JN173055: 36..677
|
qnrB27 group; only found in Citrobacter braakii as of March 2017
|
|
qnrB34
|
JN173056: 39..683
|
qnrB11 group
|
|
qnrB35
|
JN173057 : 2307..2951
|
qnrB8 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB36
|
JN173058 : 37..681
|
qnrB5 group; only foudn in Citrobacter freundii as of March 2017
|
|
qnrB37
|
JN173059: 36..680
|
qnrB11 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB38
|
JN173060: 2307..2951
|
qnrB8 group; only found in Citrobacter as of March 2017
|
|
qnrB39
|
ABWL02000005 : 134210..133566
|
only found in Citrobacter youngae as of March 2017
|
|
qnrB40
|
JN166689 : 16..660
|
qnrB5 group; only found in Citrobacter braakii as of March 2017
|
|
qnrB41
|
JN166690 : 37..681
|
qnrB1 group: only found in Citrobacter freundii as of April 2017
|
|
qnrB42
|
JN680743: 1..645
|
qnrB1 group
|
|
qnrB43
|
JQ349151: 37..680
|
qnrB1 group
|
|
qnrB44
|
JQ349153: 37..680
|
qnrB1 group
|
|
qnrB45
|
JQ349152: 1..680
|
qnrB1 group
|
|
qnrB46
|
JQ349154 : 37..680
|
qnrB5 group
|
|
qnrB47
|
JQ349155 : 37..680
|
qnrB5 group; also called qnrB51
|
|
qnrB48
|
JQ762640: 37..681
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB49
|
JQ582718: 37..681
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB50
|
JX440357 : 136..780
|
qnrB5 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB52
|
EF488762: 1..645
|
qnrB1 group
|
|
qnrB53
|
HQ704413 : 37..681
|
qnrB31 group
|
|
qnrB54
|
HE820727 : 587..1231
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB55
|
KF730650 : 1..645
|
qnrB4 group
|
|
qnrB56
|
JX259317 : 37..681
|
qnrB5 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB57
|
JX259318 : 37..681
|
qnrB1 group; only found in Citrobacter as of April 2017
|
|
qnrB58
|
JX259319 : 37..681
|
qnrB1 group; only found in Citrobacter as of March 2017
|
|
qnrB59
|
JX259320 : 37..681
|
qnrB5 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB60
|
AB734055 : 377..1021
|
qnrB8 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB61
|
AB734053 : 2304..2948
|
qnrB5 group; only found in Citrobacter as of March 2017
|
|
qnrB62
|
JX987101 : 37..681
|
qnrB5 group; only found in Citrobacter freundii as of March 2017, but located on a plasmid
|
|
qnrB64
|
KC580653: 1..645
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB65
|
KC580654: 1..645
|
qnrB4 group; only found in Citrobacter freundii as of July 2017
|
|
qnrB66
|
KC580655: 1..645
|
qnrB1 group; only found in Citrobacter as of April 2017
|
|
qnrB67
|
KC580656: 1..645
|
qnrB5 group: only found in Citrobacter braakii as od April 2017
|
|
qnrB68
|
KC58065: 1..645
|
qnrB5 group; only found in Citrobacter braakii as of April 2017
|
|
qnrB69
|
KC580658 : 1..645
|
qnrB11 group
|
|
qnrB70
|
KC580659: 1..645
|
qnrB5 group; only found in Citrobacter braakii as of March 2017
|
|
qnrB71
|
KC580660: 1..645
|
qnrB5 group; only found in Citrobacter braakii as of March 2017
|
|
qnrB72
|
KC741443 : 1..645
|
qnrB5 group; only found in Citrobacter as of March 2017
|
|
qnrB73
|
KF443075 : 1..645
|
qnrB27 group; only found in Citrobacter as of March 2017
|
|
qnrB74
|
KJ415247: 1..645
|
qnrB1 group
|
|
qnrB75
|
KP207591: 2720..2076
|
qnrB1 group; found in Citrobacter freundii only as of March 2017
|
|
qnrB76
|
KM985469 : 1..645
|
qnrB1 group
|
|
qnrB77
|
KM985470: 1..645
|
qnrB1 group; only found in Citrobacter freundii as of April 2017
|
|
qnrB78
|
KM985471 : 1..645
|
qnrB1 group; also called qnrB79; only found in Citobacter freundii as of April 2017
|
|
qnrB80
|
KM985473 : 1..645
|
qnrB1 group; only found in Citrobacter frendii as of April 2017
|
|
qnrB81
|
KX372671 : 163..807
|
qnrB5 group; only found in Citrobacter freundii as of March 2017
|
|
qnrB82
|
KX372672 : 163..807
|
qnrB5 group; only found in Citrobacter freundii as of March 2017
|
|
qnrC
|
EU917444: 1717..2382
|
|
|
qnrD1
|
FJ228229: 554..1198
|
|
|
qnrD2
|
KF055448: 61..705
|
|
|
qnrE1
|
KX118608: 15316..14672
|
formerly called qnrB88
|
|
qnrS1
|
AB178643: 1377..2033
|
|
|
qnrS2
|
DQ485530: 1..657
|
|
|
qnrS3
|
EU077611 : 1..656
|
qnrS1-like
|
|
qnrS4
|
FJ418153: 1..657
|
qnrS1-like
|
|
qnrS5
|
HQ631377 : 1..657
|
|
|
qnrS6
|
HQ631376: 1..656
|
qnrS2-like
|
|
qnrS7
|
KF730651: 1..657
|
qnrS1-like
|
|
qnrS8
|
KF730652: 1..657
|
qnrS1-like
|
|
qnrS9
|
KF732714: 1..657
|
qnrS1-like
|
|
qnrVC1
|
EU436855: 1402..2058
|
in gene cassette
|
|
qnrVC2
|
AB200915: 0..0
|
|
|
qnrVC3
|
GU944730: 881..1576
|
|
|
qnrVC4
|
GQ891757 : 2005..2662
|
|
|
qnrVC5
|
JN408080: 1..657
|
sequence of gene only currently available
|
|
qnrVC6
|
GU944730: 881..1576
|
|
|
qnrVC7
|
KM555152 : 1..657
|
|
