|
aacA1-gcuG
|
AF047479: 2143..3300
|
contains two orfs but only one attC site
|
|
aacA2
|
X12618: 896..1421
|
also called orfB and aac(6')-Id
|
|
aacA3
|
AY123251: 2926..3553
|
also called aac(6')-IIa
|
|
aacA4-C329
|
AF043381: 285..923
|
has C residue at nt 329 encoding Ser associated with gentamicin resistance
|
|
aacA4-T326-C329
|
: 0..0
|
has a T residue at nt 326 encoding Leu and a C residue at nt 329 encoding Ser, associated with resistance to both gentamicin and amikacin (see Casin et al. 2003 Antimicrobial Agents Chemother 47:697-703)
|
|
aacA4-T329
|
U59183: 281..919
|
has T residue at nt 329 encoding Leu associated with amikacin resistance
|
|
aacA4-crA
|
AJ971343: 397..1035
|
has a T to A mutation at nt 283 and a G to T mutation at nt 514 giving the aac(6')-Ib-cr cassette that confers low-level resistance to fluoroquinolones
|
|
aacA4-crC
|
AY259086: 1623..2261
|
has a T to C mutation at nt 283 and a G to T mutation at nt 514 giving the aac(6')-Ib-cr cassette that confers low-level resistance to fluoroquinolones
|
|
aacA4/aadA1b
|
GQ856538: 2399..3308
|
nt 1-59 of the aacA4 cassette followed by nt 6-end of the aadA1b cassette
|
|
aacA4/aadA2
|
GQ896541: 122..1552
|
nt 1-584 of the aacA4 cassette followed by nt 10-end of the aadA2 cassette
|
|
aacA4b
|
DQ393784: 2461..3099
|
variant aacA4 cassette with an attC site that is only 77% identical to the usual attC site
|
|
aacA5
|
L06163: 507..1159
|
also called aac(6')-IIb
|
|
aacA7
|
U13880.2: 299..889
|
|
|
aacA8
|
AY444814: 3328..3966
|
|
|
aacA16
|
Z54241: 421..1132
|
also called aac(6')-Il and aac(6')-Im
|
|
aacA17
|
AF047556: 78..789
|
also called aac(6')-Ip and aac(6')-Iq
|
|
aacA27
|
AF162771: 36..773
|
also called aac(6')-IIc
|
|
aacA28
|
AB104852: 1905..2551
|
also called aac(6')-Iae
|
|
aacA29a
|
AY139599: 737..1248
|
|
|
aacA29b
|
EU118148: 1991..2496
|
closely related to the aadA29a gene cassette but has differences in the attC site
|
|
aacA30
|
AY289608: 1472..2197
|
also called aac(6')-I30
|
|
aacA31
|
AJ640197: 2414..3052
|
also called aac(6')-31
|
|
aacA32
|
EF614235: 2222..2918
|
also called aac(6')-32
|
|
aacA33-
|
AJ584652: 1914..2334
|
also called aac(6')-30; sequence of spacer fused cassette only is currently available
|
|
aacA34
|
AY553333: 1376..1841
|
|
|
aacA35
|
AJ628983: 1960..2659
|
|
|
aacA37
|
DQ302723: 69..530
|
IR=12
|
|
aacA38
|
EF382672: 112387..111841
|
|
|
aacA39
|
EU886977: 514..1207
|
also called aac(6')-Iai
|
|
aacA40
|
EU912537: 2067..2766
|
also called aac(6')-IIa
|
|
aacA41
|
AB462903: 1151..1861
|
also called aac(6')-Iaf
|
|
aacA42
|
GQ337064: 1151..1876
|
|
|
aacA43
|
HQ247816: 608..1290
|
|
|
aacA44
|
JQ407409: 2041..2741
|
|
|
aacA45
|
JN624388: 2279..2743
|
|
|
aacA46
|
AB709942: 1151..2090
|
also called aac(6')-Iaj
|
|
aacA47
|
CP003601: 208506..209159
|
|
|
aacA48
|
AB472901: 1195..1743
|
also called aac(6')-Iag
|
|
aacA49
|
: 0..0
|
|
|
aacA51
|
KF525275: 98..750
|
|
|
aacA52
|
KF525276: 98..725
|
|
|
aacA54
|
KJ138219: 974..1715
|
|
|
aacA56
|
KM201605: 574..1298
|
|
|
aacC1
|
U90945: 2568..1992
|
also called aac(3)-Ia
|
|
aacC2
|
GU390401: 1762..2334
|
also called aac(3)-Ib
|
|
aacC3
|
AJ511268: 1276..1865
|
also called aac(3)-Ic
|
|
aacC4
|
AF318077: 2020..2595
|
|
|
aacC5
|
AB114632: 83..646
|
also called aac(3)-Id
|
|
aacC6
|
AY884051: 49..625
|
also called aac3-I
|
|
aacC7
|
CP000282: 2333601..2334159
|
also called aacC-A7
|
|
aacC11
|
AJ877225: 5772..5198
|
also called aac(3)-I
|
|
aadA1/24/1 hybrid
|
KT754161: 78827..79682
|
|
|
aadA1/aadB
|
AM932676: 98..704
|
nt 1-17 of aadA1 cassette followed by nt 2-end of aadB cassette
|
|
aadA1a
|
X12870: 1290..2145
|
also called ant(3'')-1a
|
|
aadA1a-aadA2R
|
X12870: 0..0
|
aadA1a cassette with aadA2-R spacer
|
|
aadA1b
|
M95287: 3311..4166
|
has changes in the 2R core site and the R-spacer compared with aadA1a
|
|
aadA2
|
X68227: 145..1000
|
|
|
aadA2-R
|
X68227: 0..0
|
aadA2 with R-spacer fusion
|
|
aadA2/1hybrid
|
FJ621588: 116151..117006
|
|
|
aadA3
|
AF047479: 1287..2142
|
hybrid of aadA2 and aadA1 gene cassettes; crossover position 758-760
|
|
aadA4
|
AF364344: 756..1649
|
|
|
aadA5
|
AF137361: 55..949
|
|
|
aadA6
|
AF140629: 52..914
|
|
|
aadA7
|
AF224733: 23..884
|
|
|
aadA8b
|
AY139603: 98..953
|
hybrid of aadA2 and aadA1 gene cassettes; crossover position 602-647
|
|
aadA9
|
AJ420072: 26764..27664
|
|
|
aadA10
|
FM207632: 618..1480
|
|
|
aadA11
|
AM261282: 23611..24466
|
|
|
aadA13
|
AY940492: 72..926
|
|
|
aadA16
|
EU678897: 1684..2546
|
also called ant(3')-Ij
|
|
aadA17
|
FJ460181: 1782..2637
|
hybrid of aadA1 and aadA2, crossover between
|
|
aadA22
|
AY550883: 65..920
|
|
|
aadA24
|
AM711129: 1243..2098
|
|
|
aadA25
|
CP003022: 336780..337635
|
apparent complex hybrid of of aadA2 and aadA1 with multiple crossovers and the aadA1b spacer
|
|
aadA26
|
HG314953: 341..1196
|
variant of aadA2 gene cassette
|
|
aadA27
|
HG314954: 1002..1857
|
variant of aadA2 gene cassette
|
|
aadA29
|
CP011593: 52316..53178
|
|
|
aadB
|
L06418: 1287..1877
|
also called ant(2'')-Ia
|
|
aadBb
|
AF364344: 117..755
|
variant of the aadB gene cassette with a 109 nt attC site related to the accC1 attC site rather than the typical 60 nt attC site
|
|
aphA15
|
Y18050.2: 4748..5659
|
|
|
aphA16
|
CP011593: 51382..52315
|
|
|
catB2/aacA38-A
|
EF382672: 112481..111841
|
nt 1-94 of catB2 cassette followed by part of a truncated cassette designated aacA38
|
